Table i:   Advantages of the TNT Refinement Package
 
Easy to use
  • Create a description of your model and go
Flexible geometry definition
  • Can define any type of molecule
  • All standard groups are predefined
  • New groups can be defined from small-molecule data
  • Chemical links to symmetry mates can be incorporated.
Tools for model building
  • Provides lists of the worst bond lengths, angles, etc.
  • Produces map files for display
  • Finds the highest peaks in a difference map
Preconditioned Conjugate Gradient method
  • Fewer cyclesof refinement are required
  • B factors are less biased to their starting values
  • All parameters varied in each cycle
Fast execution time
  • Usually 20 times faster than other programs
  • Near real-time performance
Stereochemical restraints on B factors
  • Low resolution models have B values consistant with those of high resolution models
Disordered solvent model
  • The solvent model is simple and accurate
  • It allows use of data to the lowest resolution
  • Better estimate of average B factor
  • Better maps are the molecule's surface